Installation

How to install fcdproc package:

Manually Prepared Environment (Python 3.7+)

Make sure all of fcdproc’s External Dependencies are installed. These tools must be installed and their binaries available in the system’s $PATH. As an additional installation setting, FreeSurfer requires a license file (see fs_license).

On a functional Python 3.7 (or above) environment with pip installed, fcdproc can be installed using the habitual command

$ python -m pip install fcdproc

Check your installation with the --version argument

$ fcdproc --version

External Dependencies

fcdproc is written using Python 3.7 (or above), and is based on nipype.

fcdproc requires some other neuroimaging software tools that are not handled by the Python’s packaging system (Pypi) used to deploy the fcdproc package: